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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9116714_9116812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9116714 - 9116812

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACACAG

U12 Branch Point Sequence:

CTTTTCTTCCCA

Flanking Amino Acid:

IINNVQEVAIPKLRCWWHKH

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

65.3

42.2

Major BPS

41.4

-0.5

1.5

46.7

38.9

Major PPT

87.2

0.84

0.7

80.4

31.6

Minor 5ss

31.5

-2.1

2.7

37.9

Minor BPS

43.6

-0.4

3.6

70.02

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041186

9114948 - 9122518

7571

ENSAPLT00000013375

9114948 - 9122478

7531