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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9120569_9120879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9120569 - 9120879

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CTTTCCTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GAAGCCCCATCC

Flanking Amino Acid:

FFSTTQRHQILYEILATTQY

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.1

60.6

38.2

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

81.9

0.72

0.7

Minor 5ss

37.8

-1.4

2.9

50.5

Minor BPS

40.1

-0.7

46.73

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041186

9114948 - 9122518

7571

ENSAPLT00000013375

9114948 - 9122478

7531