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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9120938_9121058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9120938 - 9121058

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCAGAA

U12 Branch Point Sequence:

CCCACCAGAATC

Flanking Amino Acid:

TCPFKVNKLQWFLGSDEQDT

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.9

40.1

Major BPS

47.4

-0.1

0.9

40.6

30.1

Major PPT

80.3

0.68

0.9

76.1

32.5

Minor 5ss

37.7

-1.4

3.3

48.2

42.1

Minor BPS

44.8

-0.4

1.7

48.52

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013375

9114948 - 9122478

7531

ENSAPLT00000041186

9114948 - 9122518

7571