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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9121196_9121339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9121196 - 9121339

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

TCCTCCTGAGAT

Flanking Amino Acid:

EELQLRVPLQALPNQTSHWS

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

67.9

0.4

1.1

65.1

45.5

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

51.7

0.13

1.9

70.15

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041186

9114948 - 9122518

7571

ENSAPLT00000013375

9114948 - 9122478

7531