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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9128185_9129809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9128185 - 9129809

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAGTAT

U12 Branch Point Sequence:

GTTTGTGTGAGT

Flanking Amino Acid:

SHLTELQEFWMNDNLVESWS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

43.8

-0.3

1.5

37.8

41.8

Major PPT

76.2

0.59

0.9

69.5

36.8

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

42.8

-0.4

2.5

66.97

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013566

9127859 - 9143323

15465

ENSAPLT00000042826

9127859 - 9143323

15465