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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9135541_9136376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9135541 - 9136376

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TGTTTTACCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTGTTTTACCT

Flanking Amino Acid:

IENLEALTELEILDISFNVL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

62.1

38.7

Major BPS

68.8

0.47

1.2

63.4

Major PPT

80.2

0.68

0.8

78.4

34.8

Minor 5ss

30.3

-2.2

2.8

32.1

35.9

Minor BPS

63.6

0.5

1.7

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042826

9127859 - 9143323

15465

ENSAPLT00000013566

9127859 - 9143323

15465