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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9146578_9147884_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9146578 - 9147884

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CGTCTCTGAATT

Flanking Amino Acid:

ECSSVFSGTVVDVIGRLKQK

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

32.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.16

1.2

59.7

40.3

Minor 5ss

38.2

-1.3

3.1

45.3

45.2

Minor BPS

0.33

1.5

70.72

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046212

9145070 - 9162651

17582

ENSAPLT00000013654

9145070 - 9163979

18910