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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9148026_9148495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9148026 - 9148495

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TAGTCCTGTACA

Flanking Amino Acid:

LSAFVSFRVDGEITSCDLLF

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

72.2

0.5

71.4

33.4

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

58.3

0.26

1.8

69.59

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013654

9145070 - 9163979

18910

ENSAPLT00000046212

9145070 - 9162651

17582