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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9149578_9149924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9149578 - 9149924

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

GTCAGCTTAGCA

Flanking Amino Acid:

GYEKKELLGKNITFLIPGFY

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

48.4

-0.1

60.83

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046212

9145070 - 9162651

17582

ENSAPLT00000013654

9145070 - 9163979

18910