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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9158867_9160291_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9158867 - 9160291

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTACGTCAC

5'SS Class:

weak_major

3'SS Sequence:

TATCTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TATCTCTGCACA

Flanking Amino Acid:

YCSPEVLSGQAYHGPELEMW

Intron Amino Acid Position:

1177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.4

54.3

Major BPS

72.5

0.56

1.1

63.4

Major PPT

73.5

0.53

0.9

68.5

Minor 5ss

34.4

-1.8

3.1

39.3

39.6

Minor BPS

49.7

-0

1.9

66.8

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046212

9145070 - 9162651

17582

ENSAPLT00000013654

9145070 - 9163979

18910