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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9169681_9171912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9169681 - 9171912

Intron Length:

2232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCC

5'SS Class:

major

3'SS Sequence:

TCGCTCCGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCTTCTCTGCTC

Flanking Amino Acid:

VSYTGKSCEKGPRPVEGFEI

Intron Amino Acid Position:

1000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.2

35.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

60.4

0.23

1.1

53.9

41.5

Minor 5ss

29.8

-2.3

3.6

41.8

45.1

Minor BPS

-1

3.4

54.3

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013976

9166363 - 9184700

18338