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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9172259_9172717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9172259 - 9172717

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCACCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTGTGTTTCACT

Flanking Amino Acid:

EGFVGIQCEEEVDACESGPC

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.4

43.3

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

75.9

0.58

0.8

66.3

34.7

Minor 5ss

32.6

-2

3.5

48.3

47.5

Minor BPS

49.7

0.06

2.2

71.92

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033610

9166363 - 9184700

18338

ENSAPLT00000013976

9166363 - 9184700

18338