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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9172832_9173662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9172832 - 9173662

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTGCTCTGAGCC

Flanking Amino Acid:

PGYVGHHCELEVDECQSEPC

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

47.5

-0.2

1.7

56.21

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033610

9166363 - 9184700

18338

ENSAPLT00000013976

9166363 - 9184700

18338