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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9179647_9180539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9179647 - 9180539

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTGCCCTTGTCC

Flanking Amino Acid:

FAGLGGIAAQAGFNAGDGKR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

0.63

0.8

69.3

36.9

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

43.8

-0.5

3.5

62.93

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033610

9166363 - 9184700

18338

ENSAPLT00000013976

9166363 - 9184700

18338