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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9228361_9228537_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9228361 - 9228537

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCAAGGACG

5'SS Class:

major

3'SS Sequence:

GCTTTCATCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GGTGCTTTCATC

Flanking Amino Acid:

HYQQHPFPPLSCSLCSPLRP

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.5

65.3

40.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

52.8

0.06

1.7

58.4

41.9

Minor 5ss

25.2

-2.9

44.3

Minor BPS

49.2

-0

1.8

59.15

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030902

9222491 - 9230687

8197