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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9236143_9236257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9236143 - 9236257

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGCCC

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAC

U12 Branch Point Sequence:

CCTGCCCCACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

55.8

40.2

Major BPS

42.9

-0.4

1.3

38.7

Major PPT

72.4

0.5

0.9

65.8

Minor 5ss

36.2

-1.6

3.5

51.2

45.5

Minor BPS

39.8

-0.9

2.1

43.6

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030302

9235930 - 9240347

4418