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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9236687_9236809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9236687 - 9236809

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

ACTCCTCCAACC

Flanking Amino Acid:

VEGRYNAVEVRALQVSSRLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

66.2

0.37

0.8

58.6

31.9

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

47.6

-0.2

1.8

59.36

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030302

9235930 - 9240347

4418