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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9237470_9237966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9237470 - 9237966

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCGAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GCATCTCTGACT

Flanking Amino Acid:

AFNPLLAGSIRSKLSRRRTA

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

69.1

0.47

60.7

37.6

Major PPT

65.4

0.35

1.1

63.8

41.9

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

54.6

0.23

1.7

69.29

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030302

9235930 - 9240347

4418