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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9241921_9242009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9241921 - 9242009

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GTGGGCTGAGCC

Flanking Amino Acid:

DLPPAGSAGTGTGGSLLFDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

69.6

0.44

0.9

62.3

34.7

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

42.5

-0.5

2.1

51.8

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046920

9241516 - 9250024

8509

ENSAPLT00000015572

9241516 - 9250024

8509