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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9242940_9243461_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9242940 - 9243461

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTCAGA

5'SS Class:

weak_major

3'SS Sequence:

CGTCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTTGATCAGTC

Flanking Amino Acid:

EELVEKKVCKGSVGILRLKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.2

55.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

76.2

0.59

0.8

69.3

31.3

Minor 5ss

41.3

-1

2.5

50.4

45.5

Minor BPS

41.9

-0.6

2.2

56.75

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015572

9241516 - 9250024

8509

ENSAPLT00000046920

9241516 - 9250024

8509

ENSAPLT00000043218

9241516 - 9250024

8509