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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9247007_9248037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9247007 - 9248037

Intron Length:

1031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TCGGGGGGAACT

Flanking Amino Acid:

MRIQKAGGNVRDGRVLGVLE

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

84.1

0.77

0.8

80.4

31.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

33.3

-1.1

2.7

51.53

48.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015572

9241516 - 9250024

8509

ENSAPLT00000046920

9241516 - 9250024

8509

ENSAPLT00000043218

9241516 - 9250024

8509