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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9249554_9249644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9249554 - 9249644

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCGCTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TTGTATGTGACT

Flanking Amino Acid:

AVNFIVSCLEANELNKERAV

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

62.7

0.32

1.4

63.4

Major PPT

75.3

0.57

0.8

35.9

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

49.4

0.04

2.2

75.5

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046920

9241516 - 9250024

8509

ENSAPLT00000043218

9241516 - 9250024

8509