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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9252580_9252783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9252580 - 9252783

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

TCGCCCAGCATG

Flanking Amino Acid:

LTLQCYNPVRDLWSVITSPF

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

79.3

0.66

0.8

31.8

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

39.5

-0.9

42.38

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015878

9251730 - 9254763

3034