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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9252973_9253049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9252973 - 9253049

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

CACCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

AGTGTCCCACCG

Flanking Amino Acid:

VLNGEIYVIGGTTVEVVEVE

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

62.1

0.27

0.9

53.9

30.6

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

38.6

-1

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015878

9251730 - 9254763

3034