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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9253206_9253394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9253206 - 9253394

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

TGAGCCACATCC

Flanking Amino Acid:

VALNNDVYVTGGSRGSQNDT

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

73.9

0.54

0.9

64.6

41.3

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

42.5

-0.5

53.61

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015878

9251730 - 9254763

3034