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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9333351_9333920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9333351 - 9333920

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CATCTGTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGTTTCTTATTC

Flanking Amino Acid:

KPKAVNLAFLGCQNFSQVLE

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

64.5

0.33

1.1

63.8

36.8

Minor 5ss

33.8

-1.8

3.3

46.8

Minor BPS

66.7

0.5

1.5

74.49

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014606

9328976 - 9338100

9125