Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_9350244_9350418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9350244 - 9350418

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGACA

5'SS Class:

major

3'SS Sequence:

CCCCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAC

U12 Branch Point Sequence:

TGCTCGTCACGC

Flanking Amino Acid:

TQQVIGRAIKDWATFALGPG

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

65.1

40.5

Major BPS

62.4

0.31

1.2

65.3

41.6

Major PPT

69.2

0.43

0.8

60.1

35.4

Minor 5ss

31.2

-2.1

3.3

40.7

45.2

Minor BPS

-0.8

2.5

50.68

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036090

9349677 - 9351326

1650