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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9352736_9352820_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9352736 - 9352820

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGGC

5'SS Class:

major

3'SS Sequence:

CCCCGTGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

CGTGGCTCATCC

Flanking Amino Acid:

LDTGGEVSDNRVLASADYFL

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

40.8

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

57.9

0.18

36.9

Minor 5ss

27.8

-2.5

3.7

41.2

45.5

Minor BPS

41.6

-0.6

2.2

50.84

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018199

9352513 - 9354299

1787

ENSAPLT00000015699

9352513 - 9353632

1120