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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9373566_9379760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9373566 - 9379760

Intron Length:

6195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTGGTTTTAACT

Flanking Amino Acid:

DLMHKGSFETAKECGQMQNK

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.9

88.2

28.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

82.4

0.73

0.8

75.8

32.8

Minor 5ss

46.6

-0.3

2.9

68.1

42.7

Minor BPS

71.6

0.75

1.3

82.67

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040613

9365297 - 9389585

24289

ENSAPLT00000015735

9365297 - 9389814

24518