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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9381715_9384400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9381715 - 9384400

Intron Length:

2686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AATTATTTAAAT

Flanking Amino Acid:

ILVEPEPLFGAPKRRRPARS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

81.9

0.72

0.9

86.8

24.5

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

63.9

0.51

1.6

78.26

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040613

9365297 - 9389585

24289

ENSAPLT00000015735

9365297 - 9389814

24518