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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9395614_9396485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9395614 - 9396485

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTAGA

5'SS Class:

major

3'SS Sequence:

CTCTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGTTTATTAAAT

Flanking Amino Acid:

EGRRSDSGSMEASNDAGSST

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

70.7

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.7

84.7

23.2

Minor 5ss

40.8

-1

2.6

48.6

42.2

Minor BPS

61.2

0.43

1.7

77.79

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015923

9394552 - 9403129

8578