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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9397858_9400196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9397858 - 9400196

Intron Length:

2339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

AACACTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

GATGCCAAAAAA

Flanking Amino Acid:

RQEYEAEVSKVEAERRAHEQ

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

73.8

0.54

0.9

69.6

40.6

Minor 5ss

37.8

-1.4

49.8

46.4

Minor BPS

44.3

-0.4

55.79

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015923

9394552 - 9403129

8578