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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9401811_9402385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9401811 - 9402385

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

TAAAGTACAAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.3

34.9

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

39.3

-1.2

2.7

49.6

40.4

Minor BPS

36.6

-0.9

2.1

52.01

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015923

9394552 - 9403129

8578