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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9402505_9402811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9402505 - 9402811

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGGGTGTT

5'SS Class:

major

3'SS Sequence:

TTCTGTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.9

0.7

0.8

75.8

32.8

Minor 5ss

33.5

-1.9

3.7

48.3

42.4

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015923

9394552 - 9403129

8578