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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9411711_9414058_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9411711 - 9414058

Intron Length:

2348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTCGATGTAAAA

Flanking Amino Acid:

SLVSCGLDMQVMLWNLQKAR

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.1

35.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

55.4

0.12

0.9

51.8

24.9

Minor 5ss

35.2

-1.7

2.8

44.4

43.3

Minor BPS

43.2

-0.5

2.2

56.76

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016003

9410786 - 9414541

3756