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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9415676_9417618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9415676 - 9417618

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCTAC

U12 Branch Point Sequence:

CCTCTCCTACCT

Flanking Amino Acid:

PQCNNAPKYQIGERIRVILD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.6

-0

1.2

47.8

37.3

Major PPT

80.7

0.69

0.8

71.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

47.1

-0.1

65.17

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016047

9415538 - 9417804

2267