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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9429834_9431943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9429834 - 9431943

Intron Length:

2110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

AGTTTCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

75.6

0.58

0.8

31.7

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

54.2

0.11

1.7

66.17

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016056

9429638 - 9434992

5355