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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9470612_9476193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9470612 - 9476193

Intron Length:

5582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATCTTCTAATCT

Flanking Amino Acid:

IISIFSGTEKGSKKKEKERP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.1

0.68

0.9

36.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

53.2

0.18

1.9

73.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016155

9470425 - 9478057

7633