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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9501450_9501826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9501450 - 9501826

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TGGGGCGCACCG

Flanking Amino Acid:

VQVYWLGPLTGMLAALLLYQ

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

76.5

0.6

0.9

72.6

37.6

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

31.8

-1.5

2.4

35.43

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021761

9500063 - 9502459

2397