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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9529737_9531894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9529737 - 9531894

Intron Length:

2158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTATTTATTT

Flanking Amino Acid:

LSAVLSLGIAALCFAAPPKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

88.9

0.87

0.6

85.3

22.1

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

59.3

0.37

1.7

77.93

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044279

9529694 - 9543767

14074

ENSAPLT00000016480

9529694 - 9543683

13990