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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9532361_9533525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9532361 - 9533525

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTTT

5'SS Class:

major

3'SS Sequence:

TCTCGCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAGCTCTTAATT

Flanking Amino Acid:

IAAEVYERSGGSTTSYYAVA

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

79.5

36.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.8

0.54

0.9

66.5

34.2

Minor 5ss

48.2

-0.2

3.2

73.2

43.7

Minor BPS

66.3

0.59

1.2

72.71

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025306

9524373 - 9600762

76390

ENSAPLT00000047287

9524373 - 9578570

54198

ENSAPLT00000016480

9529694 - 9543683

13990

ENSAPLT00000046092

9524373 - 9543767

19395

ENSAPLT00000044279

9529694 - 9543767

14074

ENSAPLT00000026800

9531698 - 9543767

12070