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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9536187_9536845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9536187 - 9536845

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCAGG

5'SS Class:

major

3'SS Sequence:

ATTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTTAT

U12 Branch Point Sequence:

CTGGGCTTATTC

Flanking Amino Acid:

YYSAIQSLRKDQLTVGPREN

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.7

46.7

Major BPS

58.5

0.21

1.4

51.4

Major PPT

0.97

0.7

88.8

27.4

Minor 5ss

31.9

-2.1

3.1

39.2

46.3

Minor BPS

45.1

-0.3

2.1

53.05

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025306

9524373 - 9600762

76390

ENSAPLT00000047287

9524373 - 9578570

54198

ENSAPLT00000016480

9529694 - 9543683

13990

ENSAPLT00000046092

9524373 - 9543767

19395

ENSAPLT00000044279

9529694 - 9543767

14074

ENSAPLT00000026800

9531698 - 9543767

12070