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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9538710_9539386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9538710 - 9539386

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CAGTCCTTAATT

Flanking Amino Acid:

SQCSKDEGQPASYFAVAVVK

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

92.8

22.7

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

65.9

0.36

68.3

Minor 5ss

41.7

-0.9

2.9

60.3

44.1

Minor BPS

77.1

0.93

1.2

80.89

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044279

9529694 - 9543767

14074

ENSAPLT00000026800

9531698 - 9543767

12070

ENSAPLT00000025306

9524373 - 9600762

76390

ENSAPLT00000047287

9524373 - 9578570

54198

ENSAPLT00000016480

9529694 - 9543683

13990

ENSAPLT00000046092

9524373 - 9543767

19395