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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9539546_9540520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9539546 - 9540520

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTATTC

Flanking Amino Acid:

IHNKTGSCDFDDYFSEGCAP

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

34.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

82.1

0.72

0.9

81.1

35.6

Minor 5ss

28.2

-2.5

2.7

28.9

37.2

Minor BPS

58.6

0.25

1.6

70.05

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025306

9524373 - 9600762

76390

ENSAPLT00000047287

9524373 - 9578570

54198

ENSAPLT00000016480

9529694 - 9543683

13990

ENSAPLT00000046092

9524373 - 9543767

19395

ENSAPLT00000044279

9529694 - 9543767

14074

ENSAPLT00000026800

9531698 - 9543767

12070