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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9542145_9578279_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9542145 - 9578279

Intron Length:

36135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GGGAGCCCTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGCCAC

U12 Branch Point Sequence:

CTGTCAGGAGCT

Flanking Amino Acid:

KIRELLEGQEKRGGSWREQK

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

77.3

37.8

Major BPS

52.3

0.06

1.4

64.2

Major PPT

44.4

-0.3

1.7

39.8

40.3

Minor 5ss

30.8

-2.2

3.1

41.8

44.7

Minor BPS

40.6

-0.6

2.4

61.86

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047287

9524373 - 9578570

54198