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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9546674_9546790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9546674 - 9546790

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTGTTT

Flanking Amino Acid:

DAGKTLLFARLLTGKYRDTQ

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

78.5

0.64

0.7

73.3

24.9

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

54.5

0.22

3.5

90.9

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048337

9546160 - 9551003

4844