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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9548489_9548906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9548489 - 9548906

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACCTAT

U12 Branch Point Sequence:

GTGCCCAGCACC

Flanking Amino Acid:

QFLERFKAAARAIVFVVDSV

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

49.4

-0

1.2

48.1

37.3

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

43.1

-0.5

2.1

54.89

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048337

9546160 - 9551003

4844