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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9549044_9549484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9549044 - 9549484

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTGG

5'SS Class:

major

3'SS Sequence:

CTTCTCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

AAAGAGCTAATT

Flanking Amino Acid:

PALLIACNKQDVTMAKSAKL

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

55.9

43.6

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

75.8

0.58

0.9

69.3

36.9

Minor 5ss

42.3

-0.9

3.1

48.2

Minor BPS

38.9

-0.7

2.3

54.24

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048337

9546160 - 9551003

4844