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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9563828_9564479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9563828 - 9564479

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTTCTTAAAA

Flanking Amino Acid:

STNSSAPKQVTYRNCSQISA

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

0.5

67.2

38.7

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

82.2

1.01

1.2

88.42

27.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265