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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9567065_9567420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9567065 - 9567420

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TATTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GATGCCTTTATT

Flanking Amino Acid:

ATSSYANFLIGAVNLPAAAL

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

83.7

0.76

0.8

77.9

30.4

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

59.5

0.38

1.8

73.68

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265